BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F04LP1|AL425894
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1534 0.0
>3x_Contig1746
Length = 26672
Score = 1534 bits (768), Expect = 0.0
Identities = 787/798 (98%), Gaps = 1/798 (0%)
Strand = Plus / Plus
Query: 1 atttcaatttatgtcttgatagctccaaaatgcttactagacggaaaacaaaggtatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 atttcaatttatgtcttgatagctccaaaatgcttactagacggaaaacaaaggtatcac 2117
Query: 61 tggaacgactcacttaacggaattaaagagatgagaactactttttcacgatagcdactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2118 tggaacgactcacttaacggaattaaagagatgagaactactttttcacgatagcaactt 2177
Query: 121 caatacatataarcg-tgcagtacatatgatatactcgaccatacattcgcatatcagca 179
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 caatacatataaacgctgcagtacatatgatatactcgaccatacattcgcatatcagca 2237
Query: 180 ttttttttaatcatttcgtatgtcgtagcgtttttcacatttttattggcgttcctaaca 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2238 ttttttttaatcatttcgtatgtcgtagagtttttcacatttttattggcgttcctaaca 2297
Query: 240 gattgcgattgartcagcctaccgtttatttgatcgtttgctctaaatctttgtatgcct 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 gattgcgattgaatcagcctaccgtttatttgatcgtttgctctaaatctttgtatgcct 2357
Query: 300 tcctctaaagacaggcaaataccagatttaacatgacgtttggccactctttgttcgata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 tcctctaaagacaggcaaataccagatttaacatgacgtttggccactctttgttcgata 2417
Query: 360 acatcttcatcaatcacgatattccaaarrataaatgcacccgtgcttgctatggcatcg 419
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2418 acatcttcatcaatcacgatattccaaaaaataaatgcacccgtgcttgctatggcatcg 2477
Query: 420 tatattagactccagttctcttgatttaagagaagatagagtccttctagaattagtatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 tatattagactccagttctcttgatttaagagaagatagagtccttctagaattagtatt 2537
Query: 480 cttgtraatttatgarctgtatgctggtcagccactggrtctttaattgcatgatcaaac 539
||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2538 cttgtaaatttatgaactgtatgctggtcagccactggatctttaattgcatgatcaaac 2597
Query: 540 ccggggaaagatatttcaggtaagtctatraagctattcgtaacattgtcgaacaatgaa 599
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2598 ccggggaaagatatttcaggtaagtctataaagctattcgtaacattgtcgaacaatgaa 2657
Query: 600 tttgtattatcttcatttacagtctctgggccagtagaatggtagtttgggtccagggaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 tttgtattatcttcatttacagtctctgggccagtagaatggtagtttgggtccagggaa 2717
Query: 660 caggtttttgacagcactttgcacaattgcaagaaattattactatcaaacgtaaacggc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2718 caggtttttgacagcactttgcacaattgcaagaaattattactatcaaacgtaaacggc 2777
Query: 720 gacccccgacgaagatgagccacagtaggatccttgaagtgatctagatgttttcttgac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2778 gacccccgacgaagatgagccacagtaggatccttgaagtgatctagatgttttcttgac 2837
Query: 780 agatggaatccatccatt 797
||||||||||||||||||
Sbjct: 2838 agatggaatccatccatt 2855
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5411
Number of Sequences: 1807
Number of extensions: 5411
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)